DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Msx1

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_034965.2 Gene:Msx1 / 17701 MGIID:97168 Length:303 Species:Mus musculus


Alignment Length:131 Identity:51/131 - (38%)
Similarity:65/131 - (49%) Gaps:9/131 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 KKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVG 361
            |..||.||.||..||..||:.|.:::|||:.||.|.:..|.|::.|||.|:||||.|.||.....
Mouse   170 KTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAE 234

  Fly   362 LELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYNL 426
            ||.|..|.........:|.|..||.   .||..||.||:.::....:.|.|...|      |..|
Mouse   235 LEKLKMAAKPMLPPAAFGLSFPLGG---PAAVAAAAGASLYSASGPFQRAALPVA------PVGL 290

  Fly   427 Y 427
            |
Mouse   291 Y 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 28/55 (51%)
Msx1NP_034965.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..53
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..112
PTZ00449 <99..>248 CDD:185628 35/77 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 135..163
Homeodomain 173..229 CDD:459649 28/55 (51%)
Blue background indicates that the domain is not in the aligned region.

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