DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and ceh-23

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_498700.1 Gene:ceh-23 / 176096 WormBaseID:WBGene00000446 Length:305 Species:Caenorhabditis elegans


Alignment Length:218 Identity:56/218 - (25%)
Similarity:79/218 - (36%) Gaps:48/218 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 FPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAA---AGVAAPPVDGGVDG 236
            |||:...|.|.:....|   |.:....:...|..:|..|.|.|..|..   |....||...  ..
 Worm    65 FPPSQPANSLILPTIPA---QPFIPNPSLLQANPSAVEALANALFATTSRRASCPEPPASS--QA 124

  Fly   237 GVGLAPPAGGDLDDSSDYHEENEDC-----------DSGNMDDHSVCSNGGKDDDGNSVKSGSTS 290
            .|.|..|:.|. .:...|.|.|.:.           .:..:.....|..       ..|.:..||
 Worm   125 TVTLQVPSTGS-PERRRYSETNMEVLLREQLAQLMPPTSQLPGMPGCYY-------QHVPAAGTS 181

  Fly   291 DMSG---------------------LSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAH 334
            .:.|                     .:...|||||.:...|.|.||..|:.|.|:...||:.||.
 Worm   182 GIQGSLDAALMGAVPLAMNSMAHSRRAANHRKARTIYGTTQTQQLEDMFKGQMYVVGAERENLAQ 246

  Fly   335 KLDLSDCQVKTWYQNRRTKWKRQ 357
            :|.||..||:.|:||||:|.:|:
 Worm   247 RLGLSPSQVRIWFQNRRSKHRRK 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 27/55 (49%)
ceh-23NP_498700.1 Homeodomain 212..268 CDD:459649 27/55 (49%)

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