DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and mab-5

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_498695.1 Gene:mab-5 / 176091 WormBaseID:WBGene00003102 Length:200 Species:Caenorhabditis elegans


Alignment Length:194 Identity:46/194 - (23%)
Similarity:81/194 - (41%) Gaps:63/194 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 HYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENED 260
            ::|.|...|::::.::..:|:|:::|||..||                     ::...|...|  
 Worm    13 YWAGAGTTASSQSASSGTSASASSSAAAAAAA---------------------NNLKTYELYN-- 54

  Fly   261 CDSGNMDDHSVCSN-------GGKDDDGN----------SVKSGST-SDMSGLSK---------- 297
                    |:..:|       |..|:..|          |...|.| :.|..:|:          
 Worm    55 --------HTYMNNMKHMLAAGWMDNSSNPFAYNPLQATSANFGETRTSMPAISQPVFPWMKMGG 111

  Fly   298 ----KQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQ 357
                :.::.|..::..|...|||.|...|||:.:.|||::..|.|::.|||.|:||||.|.|::
 Worm   112 AKGGESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKE 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 23/55 (42%)
mab-5NP_498695.1 Homeodomain 118..174 CDD:459649 23/55 (42%)

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