DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and ceh-13

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_498655.1 Gene:ceh-13 / 176069 WormBaseID:WBGene00000437 Length:202 Species:Caenorhabditis elegans


Alignment Length:206 Identity:51/206 - (24%)
Similarity:74/206 - (35%) Gaps:60/206 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 PHGKLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAA---AAAAAAAAAAAGVAAPP 229
            ||.....:|.|               ..:|.:..::.:..|:..|   ||..:......|..:||
 Worm    11 PHNYYQDWPTT---------------HSYYPSVPSSYSPLNHHPADIWAAHPSNYIMGNGHVSPP 60

  Fly   230 VDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSG 294
            ....     ||:|||....:.|::.                        ..|.:....:|.....
 Worm    61 ATAS-----GLSPPASRSSNSSAEL------------------------PTGVTASQHNTYKWMH 96

  Fly   295 LSKKQRKA-------------RTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTW 346
            ..:.||.|             ||.||.|||..|||.|...||::...|.|:|..|.|.:.|||.|
 Worm    97 TKRSQRPAAPKKKVIDENGTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIW 161

  Fly   347 YQNRRTKWKRQ 357
            :||||.|.|::
 Worm   162 FQNRRMKEKKR 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 29/68 (43%)
ceh-13NP_498655.1 Homeodomain 118..164 CDD:459649 22/45 (49%)

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