Protein Alignment B-H1 and lin-39

DIOPT Version :10

• Sequence 1: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_001021164.1
• Gene: lin-39 / 176068
• WormBaseID: WBGene00003024
• Length: 253
• Species: Caenorhabditis elegans
• Alignment Length: 261
• Identity: 66/261 - (25%)
• Similarity: 113/261 - (43%)
• Gaps: 70/261 - (26%)

  Fly   110 SGSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPPTHPHTHPHALMHPHGKLGH 174
            |.||..||.:.|::.:::.     ||.:.....|.|.                         :|:
 Worm    20 SSSSSSSSSSSSSSTSSVG-----ASGIPSSSELSST-------------------------IGY 54

  Fly   175 FPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAP--PVDGGVDGG 237
            .|.||          :||:..|:      .:..:..:::..|:..|::.|:..|  |:.|  |..
 Worm    55 DPMTA----------SAALSAHF------GSYYDPTSSSQIASYFASSQGLGGPQYPILG--DQS 101

  Fly   238 VGLAPPAGGDLDDSSDYHE----ENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGS-------TSD 291
            :...|..      :|.:|:    |.:|.|..:.|...:   .|.|||.:....|:       ...
 Worm   102 LCYNPSV------TSTHHDWKHLEGDDDDDKDDDKKGI---SGDDDDMDKNSGGAVYPWMTRVHS 157

  Fly   292 MSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKR 356
            .:|.|:.:::.|||:|.:|:..|||.|...|||:.:.|.|:||.|.|::.|||.|:||||.|.|:
 Worm   158 TTGGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKK 222

  Fly   357 Q 357
            :
 Worm   223 E 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	27/55 (49%)
lin-39	NP_001021164.1	Homeodomain	166..222	CDD:459649	27/55 (49%)