DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Hoxd13

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_032301.2 Gene:Hoxd13 / 15433 MGIID:96205 Length:339 Species:Mus musculus


Alignment Length:367 Identity:77/367 - (20%)
Similarity:127/367 - (34%) Gaps:119/367 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 SSGGS-----TTTASGIGKPNRSR-FMINDILAG-------SAAAAFYKQQQHHQQLHHHNNNNN 109
            :.||:     .:::|.:..|.:.| |:...:.||       :||||............:...:..
Mouse    14 ADGGAAGAAPASSSSSVAAPGQCRGFLSAPVFAGTHSGRAAAAAAAAAAAAAAASSFAYPGTSER 78

  Fly   110 SGSSGGSS--------------------------------PAHSNNNNNING-DNCEASNVAGVG 141
            :|||..||                                ||.....:..|| .:|..|:  |||
Mouse    79 TGSSSSSSSSAVIATRPEAPVAKECPAPAAAATAAAPPGAPALGYGYHFGNGYYSCRMSH--GVG 141

  Fly   142 VLPSALHHPQPHPPTHPHTHPHALMHPHGKLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAA 206
            :..:||.                 ..||..||.||                ::::...:..|:::
Mouse   142 LQQNALK-----------------SSPHASLGGFP----------------VEKYMDVSGLASSS 173

  Fly   207 RNNAAAAAAAAAAAAAAGVAAP--PVDGGVD--GGVGLAPPAGGDLDDSSDYHE---ENEDCDSG 264
            .......|.|...:...|..:|  .|.|.:|  ...|...|.          ||   ..|...|.
Mouse   174 VPTNEVPARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPR----------HEAYISMEGYQSW 228

  Fly   265 NMDDHSVCSNG-------GKDDDGNS--VKSGSTSDMS------GLSKKQRKARTAFTDHQLQTL 314
            .:      :||       .||....|  .||....|::      .:.::.||.|..:|..||:.|
Mouse   229 TL------ANGWNSQVYCAKDQPQGSHFWKSSFPGDVALNQPDMCVYRRGRKKRVPYTKLQLKEL 287

  Fly   315 EKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKR 356
            |..:...|:::..:|:.::...:||:.||..|:||||.|.|:
Mouse   288 ENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVKDKK 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 20/55 (36%)
Hoxd13NP_032301.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 3/18 (17%)
HoxA13_N <121..168 CDD:463521 15/81 (19%)
Homeodomain 273..329 CDD:459649 20/55 (36%)

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