DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Hoxa6

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_034584.1 Gene:Hoxa6 / 15403 MGIID:96178 Length:232 Species:Mus musculus


Alignment Length:253 Identity:59/253 - (23%)
Similarity:98/253 - (38%) Gaps:67/253 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 PTHPHTHPHAL--------MHPHG--KLGHFPPTAGGNGLNVAQYAAA--MQQHYAAAAAAAAAR 207
            ||.|.:.|...        ::|.|  .|..||.:.|.:.|....|.:.  .||..:..|...|:.
Mouse     8 PTFPGSLPSGQDSFLGQLPLYPAGYDALRPFPASYGASSLPDKTYTSPCFYQQSNSVLACNRASY 72

  Fly   208 NNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLD----DSSDYHEENEDCDSGNMDD 268
            ...|:...:              |..:.|    |.|:|.:..    |...:..|.:....|::..
Mouse    73 EYGASCFYS--------------DKDLSG----ASPSGNNKQRGPGDYLHFSPEQQYKPDGSVQG 119

  Fly   269 HSVCSNGGKDDDGNSVK---------------SGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSF 318
            .::      .::|...|               :|:.....|     |:.|..:|.:|...|||.|
Mouse   120 KAL------HEEGTDRKYTSPVYPWMQRMNSCAGAVYGSHG-----RRGRQTYTRYQTLELEKEF 173

  Fly   319 ERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQT-------AVGLELLAEAG 369
            ...:||:.:.|.|:|:.|.|::.|:|.|:||||.|||::.       |.|.:..|:||
Mouse   174 HFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQASGEDSEAKAG 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 24/55 (44%)
Hoxa6NP_034584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 88..126 6/43 (14%)
Antp-type hexapeptide 135..140 0/4 (0%)
Homeodomain 155..211 CDD:459649 24/55 (44%)

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