DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Hoxa13

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_032290.1 Gene:Hoxa13 / 15398 MGIID:96173 Length:386 Species:Mus musculus


Alignment Length:18 Identity:7/18 - (38%)
Similarity:11/18 - (61%) Gaps:2/18 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SKHE--VTILGGLNEFCV 36
            :|||  ||:..|..:.|:
Mouse    57 NKHEIVVTLKNGAGQKCL 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649
Hoxa13NP_032290.1 HoxA13_N <151..222 CDD:463521
Homeodomain 321..377 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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