DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Hmx2

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_666110.1 Gene:Hmx2 / 15372 MGIID:107159 Length:273 Species:Mus musculus


Alignment Length:235 Identity:68/235 - (28%)
Similarity:96/235 - (40%) Gaps:65/235 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 GVDGGVGLAPPAGGD----LDDS-SDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDM 292
            |...|.|.|.||..:    |..| .|:.||.|          .:...|.........:.|.....
Mouse    90 GTPKGSGGAGPAASERTPFLSPSHPDFKEEKE----------RLLPAGSPSPGPERPRDGGAERQ 144

  Fly   293 SGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQ 357
            :|.:||  |.||.|:..|:..||.:|:.::|||..||..||..|.|::.|||||:||||.|||||
Mouse   145 TGAAKK--KTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQ 207

  Fly   358 TAVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAH-GATPHTNIDIYYRQAAAAAAMQKP 421
            .:..||                            ||..|| .|.....:.:.:|.   ::.::.|
Mouse   208 LSAELE----------------------------AANMAHASAQTLVGMPLVFRD---SSLLRVP 241

  Fly   422 LPYNLYAGVPSVGVGVGVGVGPAPFSHLSASSSLSSLSSY 461
            :|.:|              ..|||..:  .||:||:|..|
Mouse   242 VPRSL--------------AFPAPLYY--PSSNLSALPLY 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 28/55 (51%)
Hmx2NP_666110.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..154 18/75 (24%)
Homeodomain 150..206 CDD:459649 29/57 (51%)

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