DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Hmx1

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_034575.1 Gene:Hmx1 / 15371 MGIID:107178 Length:332 Species:Mus musculus


Alignment Length:486 Identity:110/486 - (22%)
Similarity:149/486 - (30%) Gaps:210/486 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 TASGIGKPNR-SRFMINDILAGSAAAAFYKQQ---------------------QHHQQLHHHNNN 107
            |..|...|.| |.|:|.::||..|..|....|                     |..::|......
Mouse     6 TEPGRATPARASSFLIENLLAAEAKGAGRSTQGDGVREEEEEDDDDPEDEDPEQARRRLQRRRQQ 70

  Fly   108 NNSGSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPPTHPHTHPHALMHPHGKL 172
            ......||.:.|.:                .|:|          |.||..|.             
Mouse    71 RAGSGPGGEARARA----------------LGLG----------PRPPPGPG------------- 96

  Fly   173 GHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGG 237
               ||.|.|.|.....|                                      |.|.||..| 
Mouse    97 ---PPFALGCGGTTRWY--------------------------------------PRVHGGYGG- 119

  Fly   238 VGLAPPAGGDLDDSSDYHEENED----------CDSGNMDDHSVCSNG---GKDD-----DGNSV 284
             ||:|    |..| .|..|..|:          |.........|.:.|   |.::     :..:|
Mouse   120 -GLSP----DTSD-RDSPETGEEMGRAESAWPRCPGPGTVPREVTTQGPATGGEEAAELAEAPAV 178

  Fly   285 KSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQN 349
            .:.:|.:..|  .:::|.||.|:..|:..||.:|:.::|||..||..||..|.|::.|||.|:||
Mouse   179 AAAATGEARG--GRRKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQN 241

  Fly   350 RRTKWKRQTAVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAA 414
            ||.|||||.|..||                           ||:.:..||.....:.:.|.::..
Mouse   242 RRNKWKRQLAAELE---------------------------AASLSPPGAQRLVRVPVLYHESPP 279

  Fly   415 AAAMQKPLPYNLYAGVPSVGVGVGVGVGPA-PFSHLSASSSLSSLSSYYQSAAAAASAANPGGPH 478
            |||                        ||| ||                           |..|.
Mouse   280 AAA------------------------GPALPF---------------------------PLAPP 293

  Fly   479 PVAPPPSVGGGSPPSGLVKPIPAHSASASPP 509
            ..||||.:.|.|  ..|..|:.|..|:||.|
Mouse   294 APAPPPPLLGFS--GALAYPLAAFPAAASVP 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 27/55 (49%)
Hmx1NP_034575.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..170 37/228 (16%)
Homeodomain 192..248 CDD:459649 27/55 (49%)
HMX family specific domain 1 251..261 5/36 (14%)
HMX family specific domain 2 264..277 2/12 (17%)

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