DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Gsx1

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_032204.1 Gene:Gsx1 / 14842 MGIID:95842 Length:261 Species:Mus musculus


Alignment Length:289 Identity:79/289 - (27%)
Similarity:101/289 - (34%) Gaps:108/289 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 PAHSNNNNNINGDNCEASNVAGVGVLP-----SALHHPQPHPPTHPHTHPHALMHPHGKLGHFPP 177
            |.|:  .:.::...|.|.....:.|.|     |.||.| |.||..|      |:.     ..|||
Mouse    35 PPHA--LHGLSPGACHARKAGLLCVCPLCVTASQLHGP-PGPPALP------LLK-----ASFPP 85

  Fly   178 TAGGNGLNVAQYAAAM--QQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGL 240
            ..       :||..|.  :||..:...       |...||||||||....:.|            
Mouse    86 FG-------SQYCHAPLGRQHSVSPGV-------AHGPAAAAAAAALYQTSYP------------ 124

  Fly   241 APPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTA 305
                   |.|...:|     |.|             .|...|.:.|            .::.|||
Mouse   125 -------LPDPRQFH-----CIS-------------VDSSSNQLPS------------SKRMRTA 152

  Fly   306 FTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGN 370
            ||..||..||:.|....|||...|.|:|..|:||:.|||.|:||||.|.|::..           
Mouse   153 FTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGK----------- 206

  Fly   371 FAAFQRLYGGSPYLGAWPYAAAAGAAHGA 399
                     ||.:.|    .|.|||..||
Mouse   207 ---------GSNHRG----GAGAGAGGGA 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 28/55 (51%)
Gsx1NP_032204.1 SNAG domain. /evidence=ECO:0000250 1..20
Homeodomain 147..203 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..261 10/46 (22%)
Blue background indicates that the domain is not in the aligned region.

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