DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H1 and Dbx1

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001005232.1 Gene:Dbx1 / 13172 MGIID:94867 Length:335 Species:Mus musculus


Alignment Length:255 Identity:62/255 - (24%)
Similarity:87/255 - (34%) Gaps:100/255 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 GLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQT 358
            |..::....|..|:|.|.:.|||:|::|||:|..:|::||.||.|.|.|||.|:||||.||:...
Mouse   176 GKPRRGMLRRAVFSDVQRKALEKTFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRMKWRNSK 240

  Fly   359 AVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLP 423
            .  .|||:..|                                               ..::.||
Mouse   241 E--RELLSSGG-----------------------------------------------CREQTLP 256

  Fly   424 YNLYAGVPSVGVGVGVGVGPAPFSHLSASSSLSSLSSYYQSAAAAASAANPGGP---HPVAPPPS 485
            ..|               .|.|           .||...|.........|||..   |..|.|..
Mouse   257 TKL---------------NPHP-----------DLSDVGQKGPGDEEEDNPGARLAYHAPADPRH 295

  Fly   486 VGGGSPPSGLVKPIPAHSASASPPPRPPSTPSPTLNPGSPPGRS-VDSCSQSDDEDQIQV 544
            :..|..|:.     ||||:|                ||.|...| .|...:.:::::|.|
Mouse   296 LLEGPLPAS-----PAHSSS----------------PGKPSDFSDSDEDEEGEEDEEITV 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 29/55 (53%)
Dbx1NP_001005232.1 PRK12323 <49..182 CDD:481241 1/5 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..102
Homeodomain 184..238 CDD:459649 29/53 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..335 32/191 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.