DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Barhl1

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_476450.1 Gene:Barhl1 / 117232 RGDID:620648 Length:327 Species:Rattus norvegicus


Alignment Length:288 Identity:115/288 - (39%)
Similarity:147/288 - (51%) Gaps:51/288 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 PPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAA-------------AAAAAAAAAGVAA 227
            |..|.|.||:         .|......:|.|::....::             ||.|..:::|..|
  Rat    66 PGAASGPGLD---------SHLQPGQLSAPAQSRTVTSSFLIRDILADCKPLAACAPYSSSGQPA 121

  Fly   228 PPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDM 292
            .|..||     .||..||.|..|..|....:...||    ::.|     |::....:.|...|..
  Rat   122 APEPGG-----RLAAKAGEDFRDKLDKSVSSASSDS----EYKV-----KEEGDREISSSRDSPP 172

  Fly   293 SGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQ 357
            ..| ||.||||||||||||..||:|||||||||||:|.|||..|:|:|.||||||||||||||||
  Rat   173 VRL-KKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQ 236

  Fly   358 TAVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPL 422
            |||||||||||||::|.||:: .|||.  :|.:..:....||.    :.:|...:|...|:|:||
  Rat   237 TAVGLELLAEAGNYSALQRMF-PSPYF--YPQSLVSNLDPGAA----LYLYRGPSAPPPALQRPL 294

  Fly   423 -PYNLYAGVPSVGVGVGVGVGPAPFSHL 449
             |..|..|:.      |....|.|...|
  Rat   295 VPRILIHGLQ------GASEPPPPLPPL 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 45/55 (82%)
Barhl1NP_476450.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90 8/32 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..181 22/82 (27%)
Homeodomain 179..235 CDD:459649 45/55 (82%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..327 4/20 (20%)

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