DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H1 and LBX1

DIOPT Version :9

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_006553.2 Gene:LBX1 / 10660 HGNCID:16960 Length:281 Species:Homo sapiens


Alignment Length:379 Identity:87/379 - (22%)
Similarity:127/379 - (33%) Gaps:164/379 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 GVAAP-------PVDGGVDGGVGLAPPAGG----------DLDDSSDYHEENEDCDSGNM----D 267
            |.|||       |:|       .|.|||..          |:.:..........|.:.::    |
Human     7 GKAAPGEERRRSPLD-------HLPPPANSNKPLTPFSIEDILNKPSVRRSYSLCGAAHLLAAAD 64

  Fly   268 DHSVCSNGGKDDDGNSVKSGSTSDMSGLS---------------------------------KKQ 299
            .|   :.||....|.::.| .||.:..|.                                 ||:
Human    65 KH---AQGGLPLAGRALLS-QTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKR 125

  Fly   300 RKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLEL 364
            ||:|||||:||:..|||.|..|||||..:|.::|.:|.|::.||.||:||||.|.||        
Human   126 RKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKR-------- 182

  Fly   365 LAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYNLYAG 429
                                                     |:...:|...:|.:          
Human   183 -----------------------------------------DLEEMKADVESAKK---------- 196

  Fly   430 VPSVGVGVGVGVGPAPFSHLSASSSLSSLSSYYQSAAAAASAANPGGPHPVAPPPSVGGGSPPSG 494
                       :||      |....:.:|:...|::.|.|     ||          |||   .|
Human   197 -----------LGP------SGQMDIVALAELEQNSEATA-----GG----------GGG---CG 226

  Fly   495 LVKPIPAHSASASPPPRPPSTPSPTLNPGSP----PGRSVDSCSQSDDEDQIQV 544
            ..|..|.........|:.|...:..|:|.||    |..|.| ||:.:::::|.|
Human   227 RAKSRPGSPVLPPGAPKAPGAGALQLSPASPLTDQPASSQD-CSEDEEDEEIDV 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeobox 303..355 CDD:278475 29/51 (57%)
LBX1NP_006553.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35 10/34 (29%)
Homeobox 128..181 CDD:278475 29/52 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..281 23/85 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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