DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and CDX4

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_005184.1 Gene:CDX4 / 1046 HGNCID:1808 Length:284 Species:Homo sapiens


Alignment Length:321 Identity:73/321 - (22%)
Similarity:108/321 - (33%) Gaps:126/321 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 TTMSSGGSTTTASGIGKPNRSRFMINDILAGSAAAAFYKQQQHHQQLHHHNNNNNSGSSGGSSPA 119
            |.||.||..|..:|                                          |:.||.|| 
Human    17 TLMSPGGDGTAGTG------------------------------------------GTGGGGSP- 38

  Fly   120 HSNNNNNINGDNCEASNVAGVGVLPSALHH-PQPHPPTHPHTHPHALMHPHGKLGHFPPTAGGNG 183
                        ..|||.|..   |:..|: ..||.|:         |.||.      |:.|..|
Human    39 ------------MPASNFAAA---PAFSHYMGYPHMPS---------MDPHW------PSLGVWG 73

  Fly   184 LNVAQYAAAMQQHYA----AAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPA 244
               :.|:...:....    ::.......|:..::.||..:...:.:.  ||.||..|. .|...|
Human    74 ---SPYSPPREDWSVYPGPSSTMGTVPVNDVTSSPAAFCSTDYSNLG--PVGGGTSGS-SLPGQA 132

  Fly   245 GGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGS--------------TSDMSGL 295
            ||.|..:                            |..:.|:.|              |..::|.
Human   133 GGSLVPT----------------------------DAGAAKASSPSRSRHSPYAWMRKTVQVTGK 169

  Fly   296 SKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKR 356
            ::.:.|.|..:||||...|||.|...:|:::|.:.|||..|.||:.|||.|:||||.|.::
Human   170 TRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKERK 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 27/55 (49%)
CDX4NP_005184.1 Caudal_act 13..170 CDD:461413 46/259 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..40 12/77 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..155 11/63 (17%)
Homeodomain 175..230 CDD:459649 27/54 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..259
Blue background indicates that the domain is not in the aligned region.

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