DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and barx1

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_004914882.1 Gene:barx1 / 100491751 XenbaseID:XB-GENE-919916 Length:253 Species:Xenopus tropicalis


Alignment Length:216 Identity:70/216 - (32%)
Similarity:91/216 - (42%) Gaps:56/216 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 HTHPHALMHPHGKLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAA--------RNNAAAAAA 215
            |..|.| ..|.|:|..|       |:.....|.....|.|...|..|:        .:..|..:.
 Frog    37 HQDPKA-SPPAGELLKF-------GVQALLSARPYHNHLALLKAEQASVFKFPLSPLSCPALGSP 93

  Fly   216 AAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDD 280
            .::|..|||       .|:.||.|            :.:|...|....|.::. ||...||..  
 Frog    94 ISSALLAAG-------SGLQGGPG------------TPHHLPLELHLRGKLES-SVSEQGGSK-- 136

  Fly   281 GNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKT 345
                           :||.|::||.||:.||..|||.||:|||||..:|.:||..|.||..||||
 Frog   137 ---------------AKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKT 186

  Fly   346 WYQNRRTKWKRQTAV---GLE 363
            ||||||.|||:...:   |||
 Frog   187 WYQNRRMKWKKIQVLQGGGLE 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 35/55 (64%)
barx1XP_004914882.1 Homeodomain 141..197 CDD:459649 35/55 (64%)

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