DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H1 and barhl1

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_004916717.1 Gene:barhl1 / 100491447 XenbaseID:XB-GENE-853661 Length:327 Species:Xenopus tropicalis


Alignment Length:288 Identity:110/288 - (38%)
Similarity:140/288 - (48%) Gaps:45/288 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 PPT---------AGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAA-----AAAAAAAAGVA 226
            ||:         ||..|:     |.||:.|.......:|...:....::     ..|........
 Frog    51 PPSPDRDCLDGVAGRQGV-----ALAMESHLQPGVQLSAPSQSRTVTSSFLIRDILADCKPLATC 110

  Fly   227 APPVDGGV---DGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGS 288
            ||....|.   |....||..|..|..|..|....:...:|.        ..|...::|:...|.|
 Frog   111 APYSSNGQPTHDLAHCLASKAADDFRDKLDKSSSSTSSESE--------YKGKVKEEGDREISSS 167

  Fly   289 TSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTK 353
            ........||.||||||||||||..||:|||||||||||:|.|||..|:|:|.||||||||||||
 Frog   168 RDSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTK 232

  Fly   354 WKRQTAVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAM 418
            |||||||||||||||||::|.||:: .|||.  :|.:..:....||.    :.:|....|...|:
 Frog   233 WKRQTAVGLELLAEAGNYSALQRMF-PSPYF--YPQSLVSNLDPGAA----LYLYRGPTAPPPAL 290

  Fly   419 QKPLPYNLYAGVPSVGV-GVGVGVGPAP 445
            |:||       ||.:.: |:..|..|.|
 Frog   291 QRPL-------VPRILIHGLQGGSEPPP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 45/55 (82%)
barhl1XP_004916717.1 Homeodomain 179..235 CDD:459649 45/55 (82%)

Return to query results.
Submit another query.