DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and LOC100486032

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_002934006.1 Gene:LOC100486032 / 100486032 XenbaseID:XB-GENE-29078139 Length:255 Species:Xenopus tropicalis


Alignment Length:216 Identity:57/216 - (26%)
Similarity:76/216 - (35%) Gaps:88/216 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 GVLPSALHHPQPHPPTHPHTHPHALMHPHGKLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAA 205
            |:.|:|   |..|.|:...|||:   :|:.... .||.:|...:.    |:...:|:..|     
 Frog    54 GLYPTA---PIYHLPSLGATHPN---YPYSSFS-APPASGHEHIK----ASLPLEHWLRA----- 102

  Fly   206 ARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHS 270
                                             ||....|.||..|:                  
 Frog   103 ---------------------------------GLLLHRGPDLHASA------------------ 116

  Fly   271 VCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHK 335
                                 ..||..|.|:.|||||..||..||..|:..||||..:|.|:|..
 Frog   117 ---------------------QPGLMGKCRRPRTAFTSQQLLELENQFKANKYLSRPKRFEVATS 160

  Fly   336 LDLSDCQVKTWYQNRRTKWKR 356
            |.|::.|||.|:||||.||||
 Frog   161 LMLTETQVKIWFQNRRMKWKR 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 30/55 (55%)
LOC100486032XP_002934006.1 Homeodomain 125..181 CDD:459649 30/55 (55%)

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