DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and AtHB23

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_564268.1 Gene:AtHB23 / 839587 AraportID:AT1G26960 Length:255 Species:Arabidopsis thaliana


Alignment Length:196 Identity:44/196 - (22%)
Similarity:56/196 - (28%) Gaps:85/196 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 HLSHQQHHPHLHHPMHDERSRSPLMLQQLGGNGGNNNNNNNNSSSASNNNNNNNNSASANSNIIS 305
            :.|.|.|        |.|....|.:||...|                                ..
plant    14 NFSLQNH--------HQEEEDHPQLLQDFHG--------------------------------FL 38

  Fly   306 GNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSS 370
            |..|..||..|..|.:|                         .|.::..||..|.|         
plant    39 GKRSPMNNVQGFCNLDM-------------------------NGDEEYSDDGSKMG--------- 69

  Fly   371 HLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKW 435
                  .||:|     ....||:.|||.||....|....::|||..|.|...|:..|:||||.:.
plant    70 ------EKKRR-----LNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARS 123

  Fly   436 K 436
            |
plant   124 K 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 21/56 (38%)
AtHB23NP_564268.1 HOX 71..124 CDD:197696 22/57 (39%)
HALZ 126..167 CDD:460477
Blue background indicates that the domain is not in the aligned region.

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