DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H2 and HB52

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_200209.1 Gene:HB52 / 835481 AraportID:AT5G53980 Length:156 Species:Arabidopsis thaliana


Alignment Length:61 Identity:23/61 - (37%)
Similarity:36/61 - (59%) Gaps:2/61 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   379 KQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQT 439
            |.:|.|  .|..|::.|||.|...|.|....:::|:|:|.|...||..|:||:|.::|.|:
plant     9 KNKKKR--LTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQS 67

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 20/55 (36%)
HB52NP_200209.1 Homeodomain 11..64 CDD:459649 20/54 (37%)

Return to query results.
Submit another query.