DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and HB-3

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_568309.2 Gene:HB-3 / 831367 AraportID:AT5G15150 Length:314 Species:Arabidopsis thaliana


Alignment Length:224 Identity:58/224 - (25%)
Similarity:81/224 - (36%) Gaps:78/224 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 RLE-ALHRHG---HGLTGDPAQHLSHLSHLSHQQHHPHLHHPMHDERSRSPLMLQQLGGNGGNNN 277
            ||| |..:||   ..|..|.|.||.  |..|.....|||.:                 |.|||..
plant    19 RLEMAFPQHGFMFQQLHEDNAHHLP--SPTSLPSCPPHLFY-----------------GGGGNYM 64

  Fly   278 NNNNNSSSASNNNNNNNNSASANSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDS 342
            .|.:.|.:          ..|.:.::...:.:::||.|                           
plant    65 MNRSMSFT----------GVSDHHHLTQKSPTTTNNMN--------------------------- 92

  Fly   343 DSDDCGGKDDDGDDSMKNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSV 407
            |.|..|.:|:..||            .||:.|...||:...      .|::.||||||....|..
plant    93 DQDQVGEEDNLSDD------------GSHMMLGEKKKRLNL------EQVRALEKSFELGNKLEP 139

  Fly   408 QDRMELANKLELSDCQVKTWYQNRRTKWK 436
            :.:|:||..|.|...|:..|:||||.:||
plant   140 ERKMQLAKALGLQPRQIAIWFQNRRARWK 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 21/56 (38%)
HB-3NP_568309.2 Homeodomain 115..168 CDD:459649 21/58 (36%)
HALZ 170..208 CDD:460477
Blue background indicates that the domain is not in the aligned region.

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