DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and AT4G03250

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_192234.2 Gene:AT4G03250 / 827999 AraportID:AT4G03250 Length:507 Species:Arabidopsis thaliana


Alignment Length:343 Identity:71/343 - (20%)
Similarity:117/343 - (34%) Gaps:95/343 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 DDGDDSMKNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANK 416
            |.|:      ::|:||.:|    :.:.|:||.:|..   |:..||..:...||.:.:.:.:||.:
plant     4 DSGE------ATADGDKAS----TENSKKRKLKTPM---QVMALENFYNEHKYPTEEMKGKLAEE 55

  Fly   417 LELSDCQVKTWYQNRRTKWKRQ-----TAVGLE-----LLAEAGN-------------------- 451
            :.|::.||..|:.:||.|.||.     .|:|.:     :|.:.|:                    
plant    56 VGLTEKQVSGWFCHRRLKDKRHVKEDGNAIGSQDRSSVVLQDRGSGLRQDSCGSTKQTDYWNPKP 120

  Fly   452 -YAAFQRLY-GGATPYLSAWPYAAAAAAQSPHGATPSAIDI-YYRQAAAAAAMQKPSLPASYRMY 513
             ....|||| |.|....|.....:::..::...:.....|: ..|..|....:|.|....||   
plant   121 REVESQRLYMGNADGEDSTSSDRSSSLRKNLVSSKDGIRDVESSRYVAHKDVIQHPQFMRSY--- 182

  Fly   514 QSSIPPGMSLPGMPAPPPPGAAPMLSGYYA--------AAAAAAASAGAQQQQQQP--------- 561
                  |.:.|              |||..        |..|.....|.|.|:..|         
plant   183 ------GYNKP--------------SGYLKVKGESENFAITAVKRQLGRQYQEDGPPLGVEFDPL 227

  Fly   562 PAASRSPATSQSANSEADCERTSSSSRQRLITPSPPLNPGSPPHRERINEEEDRERDEERDIERE 626
            |..:..|.|:...:...............|:......|||......|.::....:.|.|.|    
plant   228 PPGAFEPQTNPIVHEPIYVGNQRRPHLPHLLGTRKSFNPGPSYELARKSKLHSPDPDSEDD---- 288

  Fly   627 RERERERDEDDEEELALE 644
                 |.|:||...:.:|
plant   289 -----EHDDDDNIMVGME 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 17/55 (31%)
AT4G03250NP_192234.2 homeodomain 21..77 CDD:238039 19/58 (33%)

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