DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and HAT1

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_193476.1 Gene:HAT1 / 827457 AraportID:AT4G17460 Length:282 Species:Arabidopsis thaliana


Alignment Length:251 Identity:65/251 - (25%)
Similarity:88/251 - (35%) Gaps:87/251 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 NSSSASNNNNNNNNSASANSNI---ISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDSD 343
            ||...:.:.......:|.||.|   :||...|:.....||      ||.|.    |...|:|.|.
plant    63 NSLPTTVDLEEETGVSSPNSTISSTVSGKRRSTEREGTSG------GGCGD----DLDITLDRSS 117

  Fly   344 SDDCGGKDDDGDDSMKNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQ 408
            |   .|..|:.:|        .|..:....|.|||.|.           ..||.:|:....|:.:
plant   118 S---RGTSDEEED--------YGGETCRKKLRLSKDQS-----------AVLEDTFKEHNTLNPK 160

  Fly   409 DRMELANKLELSDCQVKTWYQNRRTKWK-RQTAVGLELL---------------AEAGNYAAFQ- 456
            .::.||.||.|:..||:.|:||||.:.| :||.|..|.|               .||....|.: 
plant   161 QKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKL 225

  Fly   457 --RLYGGATP--------------------------YLSAWPYAAAAAAQSPHGAT 484
              ||||..:|                          .||.|       .|..||:|
plant   226 SPRLYGQMSPPTTLLMCPSCERVAGPSSSNHNQRSVSLSPW-------LQMAHGST 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 17/56 (30%)
HAT1NP_193476.1 HD-ZIP_N 8..98 CDD:461370 9/34 (26%)
HOX 134..188 CDD:197696 21/64 (33%)
HALZ 190..233 CDD:128634 12/42 (29%)

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