DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and HB-2

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_193411.1 Gene:HB-2 / 827384 AraportID:AT4G16780 Length:284 Species:Arabidopsis thaliana


Alignment Length:196 Identity:51/196 - (26%)
Similarity:82/196 - (41%) Gaps:48/196 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 NNNNNNNNSSSASNNNNNNNNSASANSNIISG--NSSSSNNNNGS----------------GNGN 321
            |..:|.:.|.:.|:::......:|.|.:..|.  ||.||.....:                |:.:
plant    22 NLKSNPSVSVTPSSSSFGLFRRSSWNESFTSSVPNSDSSQKETRTFIRGIDVNRPPSTAEYGDED 86

  Fly   322 MLLGGPGSSIS---GDQASTIDDSDSDDCGG--KDDDGDDSMKNGSSANGDSSSHLSLSLSKKQR 381
            ..:..|.|::|   |.::...:|:|.....|  .|:|||:|.|             .|.|||.|.
plant    87 AGVSSPNSTVSSSTGKRSEREEDTDPQGSRGISDDEDGDNSRK-------------KLRLSKDQS 138

  Fly   382 KARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWK-RQTAVGLEL 445
                       ..||::|:....|:.:.:..||.:|.|...||:.|:||||.:.| :||.|..|.
plant   139 -----------AILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEF 192

  Fly   446 L 446
            |
plant   193 L 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 16/56 (29%)
HB-2NP_193411.1 HD-ZIP_N 8..107 CDD:461370 16/84 (19%)
HOX 128..182 CDD:197696 21/77 (27%)
HALZ 184..227 CDD:128634 5/10 (50%)

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