DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and hmx1

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001106998.1 Gene:hmx1 / 797503 ZFINID:ZDB-GENE-080204-54 Length:282 Species:Danio rerio


Alignment Length:117 Identity:44/117 - (37%)
Similarity:65/117 - (55%) Gaps:7/117 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 DDGDDSMKNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANK 416
            |:|||:.:.....:|..:|...   |.:::|.||.|:..|:..||.:|:.::|||..:|..||..
Zfish   125 DEGDDARQLFDERSGPDTSEPG---SARKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAAS 186

  Fly   417 LELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNYAAFQRL----YGGATP 464
            |.|::.|||.|:||||.|||||.|..||.:....|.....|:    :..|||
Zfish   187 LHLTETQVKIWFQNRRNKWKRQLAADLEAVNFNHNSQRIVRVPILYHDKATP 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 26/55 (47%)
hmx1NP_001106998.1 Homeodomain 151..207 CDD:459649 26/55 (47%)

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