DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H2 and lbx1b

DIOPT Version :9

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001156784.1 Gene:lbx1b / 793810 ZFINID:ZDB-GENE-050309-27 Length:265 Species:Danio rerio


Alignment Length:234 Identity:65/234 - (27%)
Similarity:85/234 - (36%) Gaps:90/234 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 KNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQ 423
            |:|....|...|      .||:||:|||||:|||..|||.|..|||||..||.::|::|.|::.|
Zfish   106 KDGLKLFGQRDS------PKKRRKSRTAFTNHQLYELEKRFLHQKYLSPADRDQIAHQLGLTNAQ 164

  Fly   424 VKTWYQNRRTKWKRQ-----------TAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAA 477
            |.||:||||.|.||.           .:.||..|.:....|..:|                .|||
Zfish   165 VITWFQNRRAKLKRDLEEMKADVESVRSTGLVPLDKLAKLADLER----------------CAAA 213

  Fly   478 QSPHGATPSAIDIYYRQAAAAAAMQKPSLPASYRMYQSSIPPGMSLPGMPAPPPPGAAPMLSGYY 542
                |||.:                                           |.|..:|.|...|
Zfish   214 ----GATGN-------------------------------------------PGPQCSPRLGHEY 231

  Fly   543 AAAAAAAASAGAQQQQQQPPAASRSPATSQSANSEADCE 581
            ........|          |.:|.|..|||..:.:.:.|
Zfish   232 KTVHKLCLS----------PMSSLSDHTSQDCSEDEEVE 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeobox 384..436 CDD:278475 31/51 (61%)
lbx1bNP_001156784.1 Homeobox 124..178 CDD:395001 31/53 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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