DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and gsx1

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001039254.1 Gene:gsx1 / 734120 XenbaseID:XB-GENE-855502 Length:243 Species:Xenopus tropicalis


Alignment Length:70 Identity:35/70 - (50%)
Similarity:43/70 - (61%) Gaps:3/70 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   369 SSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRT 433
            ||...||.||:.   |||||..||..||:.|....|||...|:|:|..|.||:.|||.|:||||.
 Frog   129 SSPSQLSSSKRM---RTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRV 190

  Fly   434 KWKRQ 438
            |.|::
 Frog   191 KHKKE 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 28/55 (51%)
gsx1NP_001039254.1 homeobox 137..196 31/62 (50%)
Homeodomain 138..194 CDD:459649 29/58 (50%)

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