DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Barx2

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001414382.1 Gene:Barx2 / 679701 RGDID:1584840 Length:290 Species:Rattus norvegicus


Alignment Length:213 Identity:63/213 - (29%)
Similarity:86/213 - (40%) Gaps:55/213 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 ANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWY 428
            |:.:|.:.......||.|::||.||:.||..|||.|::|||||..||::||..|.|:..||||||
  Rat   128 ASSESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWY 192

  Fly   429 QNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHG-----ATPSAI 488
            ||||.|||:..                  |.||            ..|...|.|     :.|::.
  Rat   193 QNRRMKWKKMV------------------LKGG------------QEAPTKPKGRPKKNSIPTSE 227

  Fly   489 DIYYRQAAAAAAMQKPSLPASYRMYQSSIPPGMSLPGMPAPPPPGAAPMLSGYYAAAAAAAASAG 553
            :|...:...:.|..:..|.              ||.|...|..|....      |.......:..
  Rat   228 EIEAEEKMNSQAQSQEQLG--------------SLQGQEEPRDPQEPK------ACLVPLEVAEP 272

  Fly   554 AQQQQQQPPAASRSPATS 571
            :||.|:.|.|:|..|..|
  Rat   273 SQQPQELPEASSEPPPLS 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 34/55 (62%)
Barx2NP_001414382.1 None

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