DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Nkx1-1

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_035450.1 Gene:Nkx1-1 / 672284 MGIID:109346 Length:440 Species:Mus musculus


Alignment Length:578 Identity:128/578 - (22%)
Similarity:177/578 - (30%) Gaps:193/578 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MPPEMSATTAAPVGSAPSATAHH--------PAAVGGGMPRPASPAVGSNTTTATATTATRSR-- 58
            :||......:.|...||:|||..        |.....|:|    |...|:|..|....|..:|  
Mouse    15 LPPPPPGPGSGPAPPAPAATARDTMDGRAELPIFPRAGVP----PLAASDTVPAVPEGAGAARPA 75

  Fly    59 -------FMITDI--------------LAGAAAASAAAAAAAAALAAASSGGGRGSPTDSEREQS 102
                   |.:.||              |.|....:..|..|.||..|..:..||....:.||...
Mouse    76 APPRPTSFSVLDILDPNKFNSRRRRCVLLGPVVPATCAPCAPAACVAVPAASGRSPRAELERRAL 140

  Fly   103 LVAQHHHHHQQQQQHHHHQQQQQQQQHQQAALQQYIVQQQQLLRFEREREREREREHYRERHSPP 167
            ..|.              ...........:|...|             |..|.|...|   .|..
Mouse   141 SAAT--------------GVAAAAGAEPTSAGDSY-------------RADEAEANGY---SSGS 175

  Fly   168 GNNPYAHHPMPPHLLAHFPPAHYAVLQQQQQQQQQQQHPHPHHLQLERERLEALHRHGHGLTGDP 232
            |.:|.|                          ..:.:.|.      :.:..||            
Mouse   176 GRSPTA--------------------------DSEDEAPE------DEDEEEA------------ 196

  Fly   233 AQHLSHLSHLSHQQHHPHLHHPMHDERSRSPLMLQQLGGNGGNNNNNNNNSSSASNNNNNNNNSA 297
                            |.:......|..|        ||:||.....:....:|....:..:::|
Mouse   197 ----------------PEVQDAQGTEEPR--------GGSGGLGARGSGCPGAAEVEASPVDDTA 237

  Fly   298 SANSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGS 362
            :....   |||..:.....:..|   .|..||:..|...:|...        :...|.|| |:| 
Mouse   238 APGPR---GNSPGAPGPPATATG---AGSAGSTPQGAAVTTKPK--------RKRTGSDS-KSG- 286

  Fly   363 SANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTW 427
                            |.|:||||||..||..||..|:..:||||.:|:.||..|.|::.|||.|
Mouse   287 ----------------KPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIW 335

  Fly   428 YQNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGATPSAIDIYY 492
            :||||||||:|.. |.:..|..|         ||..|...|.|.|......||...:|       
Mouse   336 FQNRRTKWKKQNP-GADTSAPTG---------GGGGPGPGAGPGAGLPGGLSPLSPSP------- 383

  Fly   493 RQAAAAAAMQKPSLPASYRMYQSSIPPGM----SLPGMPAPPPPGAAPMLSGYYAAAA 546
             ...|..|:..|:      .|.:..|.|:    .||.:.:|.......:.|..|.|.|
Mouse   384 -PMGAPLALHGPA------GYPAHSPGGLVCAAQLPFLSSPAVLSPFVLGSQTYGAPA 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 32/55 (58%)
Nkx1-1NP_035450.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82 17/70 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..291 38/261 (15%)
Homeodomain 289..345 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..387 16/62 (26%)

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