DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and vox

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_571773.1 Gene:vox / 64807 ZFINID:ZDB-GENE-010108-1 Length:242 Species:Danio rerio


Alignment Length:144 Identity:42/144 - (29%)
Similarity:69/144 - (47%) Gaps:33/144 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 NSASANSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMK 359
            :|....:.:...|.||.:.:..||..:    |..|..:..:.:::            :||.|:.|
Zfish    65 SSKETPAQVTPRNCSSPSFSENSGYSS----GYESEAAASECASV------------EDGHDAEK 113

  Fly   360 NGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQV 424
            :|::                 |:.||.||..|:..|||.|.:.|||...:|::.|.||.||:.|:
Zfish   114 DGAT-----------------RRIRTKFTPEQIDKLEKIFNKHKYLDAGERVKTALKLGLSETQI 161

  Fly   425 KTWYQNRRTKWKRQ 438
            :||:||||.|.||:
Zfish   162 RTWFQNRRMKLKRE 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 27/55 (49%)
voxNP_571773.1 Homeodomain 118..174 CDD:459649 27/55 (49%)

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