Protein Alignment B-H2 and Vax1

DIOPT Version :10

• Sequence 1: NP_523386.1
• Gene: B-H2 / 32723
• FlyBaseID: FBgn0004854
• Length: 645
• Species: Drosophila melanogaster
• Sequence 2: NP_072158.1
• Gene: Vax1 / 64571
• RGDID: 621132
• Length: 336
• Species: Rattus norvegicus
• Alignment Length: 286
• Identity: 76/286 - (26%)
• Similarity: 111/286 - (38%)
• Gaps: 74/286 - (25%)

  Fly   304 ISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDS 368
            :|.|:...:.......|::    |.:.:...|.:......|:||        :..|:.|||:.|.
  Rat    21 VSKNAHKESREIKGAEGSL----PAAFLKEPQGAFSASGASEDC--------NKSKSNSSADPDY 73

  Fly   369 SSHLSLSLSK---------------KQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLE 418
            ...:.:..:|               :.::.||:||..||..||..|:|.:|:..::|.|||.:|.
  Rat    74 CRRILVRDAKGSIREIILPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLN 138

  Fly   419 LSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGA 483
            ||:.|||.|:||||||.|:......||                             .:..|...|
  Rat   139 LSETQVKVWFQNRRTKQKKDQGKDSEL-----------------------------RSVVSETAA 174

  Fly   484 TPSAIDIYYRQAAAAAAMQKPSLPASYRMYQSSIPP------GMSLPGMPAPPPPGAAPMLSGYY 542
            |.|.:    |.......:..|.|||       .:||      |.:|.| |:.|..||........
  Rat   175 TCSVL----RLLEQGRLLSPPGLPA-------LLPPCATGALGSALRG-PSLPALGAGAAAGSAA 227

  Fly   543 AAAAAAAASAGAQQQQQQPPAASRSP 568
            ||||||.|...|....|.|||...:|
  Rat   228 AAAAAATAPGPAGAASQHPPAVGGAP 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H2	NP_523386.1	Homeodomain	381..437	CDD:459649	28/55 (51%)
Vax1	NP_072158.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..39		3/17 (18%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	50..69		5/26 (19%)
		vax upstream domain	72..99		2/26 (8%)
		homeobox	100..159		29/58 (50%)
		Homeodomain	101..157	CDD:459649	28/55 (51%)
		vax downstream domain	178..189		1/14 (7%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	236..267		6/18 (33%)
		vax terminal domain	315..323