DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H2 and barx1

DIOPT Version :9

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001020120.1 Gene:barx1 / 553644 ZFINID:ZDB-GENE-050522-28 Length:248 Species:Danio rerio


Alignment Length:87 Identity:46/87 - (52%)
Similarity:54/87 - (62%) Gaps:15/87 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 GDSSSHLSLSL---------------SKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELAN 415
            |.||.||.|.|               :||.|::||.||:.||..|||.||:|||||..||::||.
Zfish   106 GSSSHHLPLDLHLRGKLDPGADAVSKTKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAE 170

  Fly   416 KLELSDCQVKTWYQNRRTKWKR 437
            .|.||..||||||||||.|||:
Zfish   171 SLGLSQLQVKTWYQNRRMKWKK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeobox 384..436 CDD:278475 34/51 (67%)
barx1NP_001020120.1 Homeobox 138..191 CDD:278475 34/52 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..248
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575738
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24330
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.840

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