DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and barhl1b

DIOPT Version :9

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001018142.1 Gene:barhl1b / 553186 ZFINID:ZDB-GENE-060118-2 Length:323 Species:Danio rerio


Alignment Length:312 Identity:120/312 - (38%)
Similarity:153/312 - (49%) Gaps:63/312 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 DPAQHLSH-LSHLSHQQHHPHLHHPMHDERSRSPLMLQQLGGNGGNNNNNNNNSSSASNNNNNNN 294
            |.||...| |::.||.||.| :..........|..:::.:                         
Zfish    64 DAAQRQGHPLAYASHLQHGP-ISAGSQPRTVASSFLIRDI------------------------- 102

  Fly   295 NSASANSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGK-DDDGDDSM 358
               .|:...::..:..|:|    |......|...|.|:.|....|..:.|.|...| .::||..:
Zfish   103 ---LADCKPLAACAPYSSN----GQPTQEAGRLASKIADDLIEKIHSNSSSDSEYKVKEEGDREI 160

  Fly   359 KNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQ 423
               ||:.......|     ||.||||||||||||..||:|||||||||||||||||..|.|:|.|
Zfish   161 ---SSSRDSPQVRL-----KKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQ 217

  Fly   424 VKTWYQNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGATPSAI 488
            |||||||||||||||||||||||||||||:|.||::  .:||.    |..:..:....||   |:
Zfish   218 VKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMF--PSPYF----YPQSLVSNLDPGA---AL 273

  Fly   489 DIYYRQAAAAAAMQKPSLPASYRMYQSSIPPGMSLPGMPAPPPPGAAPMLSG 540
            .:|...:|...|:|:|.:|   |:...      .|.|...||||  .|.|||
Zfish   274 YLYRGPSAPPPALQRPLVP---RILLH------GLQGASEPPPP--LPPLSG 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeobox 384..436 CDD:278475 43/51 (84%)
barhl1bNP_001018142.1 Oxidoreductase_nitrogenase 48..>88 CDD:295466 10/24 (42%)
Homeobox 178..230 CDD:278475 43/51 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575741
Domainoid 1 1.000 103 1.000 Domainoid score I6717
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 152 1.000 Inparanoid score I4314
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002353
OrthoInspector 1 1.000 - - mtm6505
orthoMCL 1 0.900 - - OOG6_114730
Panther 1 1.100 - - O PTHR24330
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10747
SonicParanoid 1 1.000 - - X1387
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.780

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