DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and barhl1b

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001018142.1 Gene:barhl1b / 553186 ZFINID:ZDB-GENE-060118-2 Length:323 Species:Danio rerio


Alignment Length:312 Identity:120/312 - (38%)
Similarity:153/312 - (49%) Gaps:63/312 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 DPAQHLSH-LSHLSHQQHHPHLHHPMHDERSRSPLMLQQLGGNGGNNNNNNNNSSSASNNNNNNN 294
            |.||...| |::.||.||.| :..........|..:::.:                         
Zfish    64 DAAQRQGHPLAYASHLQHGP-ISAGSQPRTVASSFLIRDI------------------------- 102

  Fly   295 NSASANSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGK-DDDGDDSM 358
               .|:...::..:..|:|    |......|...|.|:.|....|..:.|.|...| .::||..:
Zfish   103 ---LADCKPLAACAPYSSN----GQPTQEAGRLASKIADDLIEKIHSNSSSDSEYKVKEEGDREI 160

  Fly   359 KNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQ 423
               ||:.......|     ||.||||||||||||..||:|||||||||||||||||..|.|:|.|
Zfish   161 ---SSSRDSPQVRL-----KKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQ 217

  Fly   424 VKTWYQNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGATPSAI 488
            |||||||||||||||||||||||||||||:|.||::  .:||.    |..:..:....||   |:
Zfish   218 VKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMF--PSPYF----YPQSLVSNLDPGA---AL 273

  Fly   489 DIYYRQAAAAAAMQKPSLPASYRMYQSSIPPGMSLPGMPAPPPPGAAPMLSG 540
            .:|...:|...|:|:|.:|   |:...      .|.|...||||  .|.|||
Zfish   274 YLYRGPSAPPPALQRPLVP---RILLH------GLQGASEPPPP--LPPLSG 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 47/55 (85%)
barhl1bNP_001018142.1 Homeodomain 175..231 CDD:459649 47/55 (85%)

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