DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Lbx2

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001102714.1 Gene:Lbx2 / 500224 RGDID:1561172 Length:196 Species:Rattus norvegicus


Alignment Length:113 Identity:44/113 - (38%)
Similarity:62/113 - (54%) Gaps:12/113 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 KKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVG 442
            :::||:|||||..|:..||:.|..||||:..:|..||.:|.|::.||.||:||||.|.||...  
  Rat    81 RRRRKSRTAFTPQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLKRDVE-- 143

  Fly   443 LELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPH-GATPSAID 489
             |:.|:..:..       |.:|.:.. |.|...:|.||. ..|||..|
  Rat   144 -EMRADLASLC-------GLSPGVLC-PPALPDSASSPDLQPTPSGPD 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 29/55 (53%)
Lbx2NP_001102714.1 Homeodomain 84..140 CDD:459649 29/55 (53%)

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