DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Dlx6

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_001414318.1 Gene:Dlx6 / 500023 RGDID:1561539 Length:298 Species:Rattus norvegicus


Alignment Length:425 Identity:102/425 - (24%)
Similarity:141/425 - (33%) Gaps:183/425 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 QQQQHHHHQQQQQQQQHQQAALQQYIVQQQQLLRFEREREREREREHYRERHSPPGNNPYAHHPM 177
            ||||....||||||||.||        ||||                      ||        |.
  Rat    26 QQQQQQQQQQQQQQQQQQQ--------QQQQ----------------------PP--------PP 52

  Fly   178 PPHLLAHFPPAHYAVLQQQQQQQQQQQHPHPHHLQLERERLEALHRHGHGLTGDPAQHLSHLSHL 242
            ||      ||.                 |.||..|.. ..:...|...|.|....|...:..||.
  Rat    53 PP------PPP-----------------PQPHSQQTS-PAMAGAHYPLHCLHSAAAAAAAAGSHH 93

  Fly   243 SHQQHHPHLHHPMHDERSRSPLMLQQLGGNGGNNNNNN--------NNSSSASNNNNNNNNSASA 299
            .|.|||   ||       .||     ....|||:.|:.        ::|..:....:.:|:||:|
  Rat    94 HHHQHH---HH-------GSP-----YASGGGNSYNHRSLAAYPYMSHSQHSPYLQSYHNSSAAA 143

  Fly   300 NSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSA 364
            .:.   |:.:.........||.:...|.|                                    
  Rat   144 QTR---GDDTDQQKTTVIENGEIRFNGKG------------------------------------ 169

  Fly   365 NGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQ 429
                         ||.||.||.::..|||.|...|::.:||::.:|.|||..|.|:..|||.|:|
  Rat   170 -------------KKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQ 221

  Fly   430 NRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGATPSAIDIYYRQ 494
            |:|:|:|:       ||.:..|                            ||.:.|       ..
  Rat   222 NKRSKFKK-------LLKQGSN----------------------------PHESDP-------LP 244

  Fly   495 AAAAAAMQKPSLPASYRMYQS----SIPPGMSLPG 525
            .:||.:.:.|:||..:.:..|    |:||...:||
  Rat   245 GSAALSPRSPALPPVWDVSASAKGVSMPPNSYMPG 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 25/55 (45%)
Dlx6NP_001414318.1 None

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