DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Abd-B

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster


Alignment Length:459 Identity:118/459 - (25%)
Similarity:164/459 - (35%) Gaps:152/459 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 EREQSLVAQHH--HHHQQQQQH---HHH------QQQQQQQQHQQAALQQYIVQQQQLLRFERER 151
            |::|.|...||  |||..|..|   |||      |||||||||...|.....|.|||        
  Fly    23 EQQQHLQQLHHHAHHHLPQPLHTTSHHHSAHPHLQQQQQQQQHAVVASSPSSVLQQQ-------- 79

  Fly   152 EREREREHYRERHSPPGNNPYAHHPMPPHLLA----HFP-PAHYAVLQQQQQQQQQ--------- 202
                :::.....||.|.:......|.|..|:|    |.| |.....||||||||||         
  Fly    80 ----QQQSTPTTHSTPTHAVMYEDPPPVPLVAVQQQHLPAPQQQQQLQQQQQQQQQQLATTPVAG 140

  Fly   203 -------------QQHPH---PHHLQLERE----------------------------------- 216
                         ||..|   |||.||.::                                   
  Fly   141 ALSPAQTPTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAP 205

  Fly   217 ---------------------RLEALH----RHGHGLTGDPA----QHLSHLSHLSHQQHHPHLH 252
                                 :|..||    |.|.|...|.:    :|.:|.:: :.:..:.|..
  Fly   206 TTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAY-NDEGFNQHYG 269

  Fly   253 HPMHDER---------SRSPLMLQQLGGNGGNNNNNNNNSSSASNNNNNNNNSASANSNIISGNS 308
            ...:|.:         ::.|:. |..|.|...:...:..:::|..|....:.||:|..: :.|.|
  Fly   270 SGYYDRKHMFAYPYPETQFPVG-QYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQS-VEGTS 332

  Fly   309 SSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLS 373
            :||.......:...|.|.|..:.|...||          ||.          ...|.|..:.:..
  Fly   333 TSSYEPPTYSSPGGLRGYPSENYSSSGAS----------GGL----------SVGAVGPCTPNPG 377

  Fly   374 LSLSKKQ---RKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKW 435
            |.....|   ||.|..::..|...|||.|....|:|.|.|.|||..|:|::.|||.|:||||.|.
  Fly   378 LHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKN 442

  Fly   436 KRQT 439
            |:.:
  Fly   443 KKNS 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 26/55 (47%)
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 26/55 (47%)

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