Protein Alignment B-H2 and ro

DIOPT Version :10

• Sequence 1: NP_523386.1
• Gene: B-H2 / 32723
• FlyBaseID: FBgn0004854
• Length: 645
• Species: Drosophila melanogaster
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 466
• Identity: 96/466 - (20%)
• Similarity: 130/466 - (27%)
• Gaps: 207/466 - (44%)

  Fly   154 EREREHYRERHSPPGN---NPYAHHPMPPHLLAHFPPAHYAVLQQQQQQQQQQQHPHPHH----- 210
            ||...|...|.|..|.   ..:||.|         ||.                 ..|:|
  Fly    46 ERLYGHLETRSSENGEIDVGTHAHKP---------PPC-----------------DTPYHSDGGS 84

  Fly   211 -------LQLERERLEALHRHG-HGLTGDPAQHLSHLSHLSHQQHHPHLHHPMHDERSRSPLMLQ 267
                   :..||..|.|...:. :|...|..||.|.    .|||||.|.|||       ..|:.|
  Fly    85 VSSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQ----QHQQHHHHHHHP-------PQLVHQ 138

  Fly   268 QLGGNGGNNNNNNNNSSSASNNNNNNNNSASANSNIISGNSSSSNNNNGSGNGNMLLGGPGSSIS 332
            :|.                                                    .:..|.:..:
  Fly   139 KLS----------------------------------------------------YVSPPPAIAA 151

  Fly   333 GDQASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLSLSLSK----------KQRKARTAF 387
            |..|:.:                  :.:...|...|..|.|...|.          :||:.||.|
  Fly   152 GGAANPV------------------LPHAFPAGFPSDPHFSAGFSAFLARRRRKEGRQRRQRTTF 198

  Fly   388 TDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNY 452
            :..|...||..|.|.:|:|...|.|||..|.|::.|:|.|:||||.|.||
  Fly   199 STEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKR--------------- 248

  Fly   453 AAFQRLYGGATPYLSAWPYAAAAAAQSPHGATPSAIDIYYRQAAAAAAMQKPSLPASYRMYQSSI 517
                                          ...:.||.:||....|.......:..:    .:::
  Fly   249 ------------------------------IEKAQIDQHYRNFVVANGFMSSIMGQA----ATTM 279

  Fly   518 PPGMSLPGMPAPPPPGAAPMLSGYYAAAAAAAA------------------SAGAQQQQQQPPAA 564
            |||....|:       |..:...||||||..||                  ....||:|||....
  Fly   280 PPGGVTGGV-------AVGVGLNYYAAAATPAALPKDNTQDANFIDIDDQFQRQQQQKQQQQQQQ 337

  Fly   565 SRSPATSQSAN 575
            .|...|:...|
  Fly   338 QRRRETTTPIN 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H2	NP_523386.1	Homeodomain	381..437	CDD:459649	25/55 (45%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	23/51 (45%)