DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and lbe

DIOPT Version :9

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster


Alignment Length:537 Identity:130/537 - (24%)
Similarity:184/537 - (34%) Gaps:164/537 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 SGGGRGSPTDSEREQSLVAQHH---HHHQQQQQHHHH------QQQQQQQQHQQAALQQYIVQQQ 142
            |.||..||        |..|||   |.|....||...      ||||...||..||.........
  Fly    18 SVGGAPSP--------LPTQHHTHPHSHPHPLQHPRASTIDLLQQQQLLMQHHAAAAAAAAAAAS 74

  Fly   143 QLLRFEREREREREREHY----RERHSPPGNNPYAHHPMPPHLLAHFPPAHYA------------ 191
            .|   .|........:::    |.|.|...:.|..|.|.||..:.. |..:..            
  Fly    75 GL---TRSAVGNLPEDYFHPLKRLRMSSSSSEPRDHTPSPPSAVPE-PQTNQTTKSAIEGVKSFS 135

  Fly   192 ---VLQQQQQQQQQQQHPHPHHLQLE--------------RERLEALHRHGHGL------TGDPA 233
               :|...::|:::...|.|:...|.              :.|.|.|..|....      :|...
  Fly   136 IADILGHSEKQREESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIV 200

  Fly   234 QHLSHL------------SHLSHQQHHPHL--HHPMHDERSRSPLMLQQLGGN-------GGNNN 277
            :...||            |.|.|.:....|  |..:.:..:....:|:.:|.|       .|::.
  Fly   201 RPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSE 265

  Fly   278 NNNNNSSSASNNNNNNNNSASANSNIISGNSS-------SSNNNNGSGNGNMLLGGPGSSISGD- 334
            .:..:|||..:....:...|.....:.:...|       |.....|||..|           || 
  Fly   266 RSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSN-----------GDT 319

  Fly   335 ------QASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLSLSLS----KKQRKARTAFTD 389
                  |.:|.|..:|.|                      .|||.:..:    ||:||:|||||:
  Fly   320 PLDALFQMTTKDFDESQD----------------------KSHLDIFSNRPQPKKKRKSRTAFTN 362

  Fly   390 HQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNYAA 454
            ||:..|||.|..|||||..||.|:|..|.||:.||.||:||||.|.||...   ||..:..:.  
  Fly   363 HQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIE---ELKKDFDSV-- 422

  Fly   455 FQRLYGGATPYLSAWPYAAAAAAQSPHGATPSAIDIYYRQAAAAAAMQKPSLPASYRMYQSSIPP 519
              :::.....:|......:....:..|.:     |:....||||||                   
  Fly   423 --KVFSAHKSFLENVNDLSILKKKPMHES-----DMVGLAAAAAAA------------------- 461

  Fly   520 GMSLPGMPAPPPPGAAP 536
            ||.:| :|...|.|.||
  Fly   462 GMVVP-VPGSVPMGGAP 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeobox 384..436 CDD:278475 32/51 (63%)
lbeNP_524435.2 Homeobox 356..410 CDD:395001 32/53 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E1_KOG0488
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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