Protein Alignment B-H2 and Ubx

DIOPT Version :10

• Sequence 1: NP_523386.1
• Gene: B-H2 / 32723
• FlyBaseID: FBgn0004854
• Length: 645
• Species: Drosophila melanogaster
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 279
• Identity: 66/279 - (23%)
• Similarity: 107/279 - (38%)
• Gaps: 84/279 - (30%)

  Fly   270 GGNGGNNNNNNNNSSSASNNNN-------------------------------NNNNSASANSNI 303
            ||.||..|.|..|:::|:..||                               :...||..|.::
  Fly   125 GGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSV 189

  Fly   304 ISGNSSSSNNNNGSGNGNMLLGGPGS------SISGDQASTIDDSD---------------SDDC 347
            ..||.::....:|.|     :.|.|:      :|||..|.|...|.               :.:|
  Fly   190 SGGNGNAGGVQSGVG-----VAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGEC 249

  Fly   348 GGKDDDGDDSMKNGSSANGDSSSHLSLSLSKK---------------QRKARTAFTDHQLQTLEK 397
              .:|.....:::..:..|..|:.:....|:.               :|:.|..:|.:|...|||
  Fly   250 --PEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEK 312

  Fly   398 SFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGA 462
            .|....||:.:.|:|:|:.|.|::.|:|.|:||||.|.|::.. .::.|.|....|..|:....|
  Fly   313 EFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQ-AIKELNEQEKQAQAQKAAAAA 376

  Fly   463 TPYLSAWPYAAAAAAQSPH 481
                     |||||.|..|
  Fly   377 ---------AAAAAVQGGH 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H2	NP_523386.1	Homeodomain	381..437	CDD:459649	23/55 (42%)
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	23/55 (42%)