DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and Antp

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:386 Identity:90/386 - (23%)
Similarity:132/386 - (34%) Gaps:117/386 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 LVAQHHHHHQQQQQH-----------------HHHQQQQQQQQHQ-------------------Q 131
            |.||..||:.|...|                 ::.|...||||||                   |
  Fly    37 LDAQQMHHYSQNANHQGNMPYPRFPPYDRMPYYNGQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQ 101

  Fly   132 AALQQYIVQQQQLLRFEREREREREREHYRERHSPPGNNPYAHHPMPPHLLAHFPPAHYAVLQQQ 196
            ...|..:.||||                 :::..|..|.........|..|....|   .|.||.
  Fly   102 TNGQLGVPQQQQ-----------------QQQQQPSQNQQQQQAQQAPQQLQQQLP---QVTQQV 146

  Fly   197 QQQQQQQQHPHPHHLQLERERLEALHRHGHGLT---GDPA---QHLSHLSHLSHQQHHP-HLHHP 254
            ...|||||.|    :.....:|:|. ..|.|:.   |.|.   |...|  |::.|...| |:.||
  Fly   147 THPQQQQQQP----VVYASCKLQAA-VGGLGMVPEGGSPPLVDQMSGH--HMNAQMTLPHHMGHP 204

  Fly   255 MHDERSRSPLMLQQLGGNGGNNNNNNNNSSSASNNNNNNNNSASANSNIIS-GNSSSSNNNNGSG 318
            .           .|||     ..:......:..:.|::|.......|.:.. |.......:.|.|
  Fly   205 Q-----------AQLG-----YTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQG 253

  Fly   319 NGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHL------SLSLS 377
            ...|..|.||......|                        |.:|.:....|.|      .....
  Fly   254 PPQMHQGHPGQHTPPSQ------------------------NPNSQSSGMPSPLYPWMRSQFGKC 294

  Fly   378 KKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQ 438
            :::::.|..:|.:|...|||.|...:||:.:.|:|:|:.|.|::.|:|.|:||||.|||::
  Fly   295 QERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 23/55 (42%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 33/187 (18%)
Homeodomain 298..354 CDD:459649 23/55 (42%)

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