DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H2 and ventx1.2

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_988861.1 Gene:ventx1.2 / 394455 XenbaseID:XB-GENE-920868 Length:262 Species:Xenopus tropicalis


Alignment Length:188 Identity:59/188 - (31%)
Similarity:85/188 - (45%) Gaps:32/188 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 SDSDDCGGKDDDGDDSMKNGSSANGDSSSHLSLS-LSKKQRKARTAFTDHQLQTLEKSFERQKYL 405
            ||.....|.:|||.:|  :|.::..:.:.|.|.| .|..||:.|||||..|:..||::|.:|:||
 Frog    90 SDEFSPAGSEDDGTES--SGRNSQENDTEHRSKSPKSDLQRRLRTAFTPQQITRLEQAFNKQRYL 152

  Fly   406 SVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTA-VGLELLAEAGNYAAFQRLYGGATPYLSAW 469
            ...:|.:||..|:||:.|||||:||||.|.|||.. ....::.....|......|.|..|.    
 Frog   153 GASERKKLATSLQLSEIQVKTWFQNRRMKLKRQIQDQQPSMVPPPVCYPQTFSYYPGGLPV---- 213

  Fly   470 PYAAAAAAQSP--------HGATPSAIDIYYRQAAAAAAMQKPSLPASYRMYQSSIPP 519
            |..:.:..|.|        |...|..:..:.|.:|                :|...||
 Frog   214 PLNSGSFYQPPAHPFQAPQHSFIPQPLHHHMRMSA----------------HQEQFPP 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 29/55 (53%)
ventx1.2NP_988861.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..129 13/40 (33%)
Homeodomain 128..184 CDD:459649 29/55 (53%)

Return to query results.
Submit another query.