Protein Alignment B-H2 and Hmx1

DIOPT Version :10

• Sequence 1: NP_523386.1
• Gene: B-H2 / 32723
• FlyBaseID: FBgn0004854
• Length: 645
• Species: Drosophila melanogaster
• Sequence 2: NP_001101833.2
• Gene: Hmx1 / 360960
• RGDID: 1304928
• Length: 333
• Species: Rattus norvegicus
• Alignment Length: 257
• Identity: 76/257 - (29%)
• Similarity: 109/257 - (42%)
• Gaps: 81/257 - (31%)

  Fly   325 GGPGSSISGDQASTIDDSDSDDCGGKDDDG----------------DDSMKNGSSANGDSSSHLS 373
            ||.|..:|.|.:    |.||.:.|  :|.|                .:....|.:|.|:.::.|:
  Rat   116 GGYGGGLSPDTS----DRDSPETG--EDMGRAESAWPRCPGPGAVPREVTTQGPAAGGEEAAELA 174

  Fly   374 -----------LSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTW 427
                       .:...:::|.||.|:..|:..||.:|:.::|||..:|..||..|:|::.|||.|
  Rat   175 EAPAVAAAAAGEARGGRRKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIW 239

  Fly   428 YQNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGATPSA-IDIY 491
            :||||.|||||.|..||                              ||:.||.||.... :.:.
  Rat   240 FQNRRNKWKRQLAAELE------------------------------AASLSPPGAQRLVRVPVL 274

  Fly   492 YRQAAAAAAMQKPSLPASYRMYQSSIPPGMSLPGMPAPPPP--GAAPMLSGYYAAAAAAAAS 551
            |.::..||.  .|:||...      .||.      ||||||  |.:..|: |..||..||||
  Rat   275 YHESPPAAT--GPTLPFPL------APPA------PAPPPPLLGFSGALA-YPLAAFPAAAS 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H2	NP_523386.1	Homeodomain	381..437	CDD:459649	26/55 (47%)
Hmx1	NP_001101833.2	Homeodomain	193..249	CDD:459649	26/55 (47%)