Protein Alignment B-H2 and lms

DIOPT Version :10

• Sequence 1: NP_523386.1
• Gene: B-H2 / 32723
• FlyBaseID: FBgn0004854
• Length: 645
• Species: Drosophila melanogaster
• Sequence 2: XP_555988.3
• Gene: lms / 3289950
• VectorBaseID: AGAMI1_011670
• Length: 479
• Species: Anopheles gambiae
• Alignment Length: 480
• Identity: 121/480 - (25%)
• Similarity: 191/480 - (39%)
• Gaps: 121/480 - (25%)

  Fly   251 LHH--PMHDERSRSPLMLQQLGGNGGNNNNNNNNSSSASNNNNNNNNSASA----------NSNI 303
            :||  |:.:.|.::...::.|...  .:.:...::|||:.....::..||:          ||.:
Mosquito    31 MHHVDPVANNRVKNSFSIEHLLAK--PDRSGTASTSSAACYRGMDDRLASSYPIAHPAQLHNSMV 93

  Fly   304 ---ISGNSSSS-----NNNNGSGNGNMLLGGPGS--SISGDQASTIDDSDSDDCGGKDDDGDDSM 358
               :...|:|:     .|.|.:.........|.|  :.|....|:.::...|:|.....:|
Mosquito    94 YQTLMTRSASAVEFLDVNKNETSAVPFAADRPPSERAESSSPESSCNEDTMDNCSEIASEG---- 154

  Fly   359 KNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQ 423
                ||:|..::|     ..::::.||||:..|::.||..|||.|||||..|..||.:|.|::.|
Mosquito   155 ----SASGGLAAH-----DDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLHLTETQ 210

  Fly   424 VKTWYQNRRTKWKRQTAVGLELLAE-------AGNYA----------AFQRLYGGATPYLSA--- 468
            :|.|:|||||||||:....:|.||.       .|::|          .|.:...|.||..|.
Mosquito   211 IKIWFQNRRTKWKRKYTADVESLASHYYSQLGIGSFARPMVVGDRLWLFSQTPNGPTPVQSLLLN 275

  Fly   469 WPYAAAAAAQSP-----HGATPSAIDIYYRQAAAAAAMQKPSLPASYRM----YQSSIP------ 518
            .|...||.|..|     |   |:||..|...:........|:.|....|    |.||||
Mosquito   276 GPQPGAAGASHPALGMQH---PAAIRPYPTLSGPIPMNAGPNFPPRPGMPPGAYLSSIPSAAAAG 337

  Fly   519 PGMSLPGMPAPPPP-------GAAPMLSG------YYAAAAAAAASAGAQQQQQQPPAASRSP-- 568
            ||..|..:|:|.|.       |..|:.||      ||.||..              |....:|
Mosquito   338 PGGFLHKIPSPSPQSRMAQPLGLRPLSSGELLEGAYYTAAGM--------------PGPKFNPNE 388

  Fly   569 -------ATSQSANSEADCER---TSSSSRQRLITPSPP-------LNPGSPPHRERINEEEDRE 616
                   ||..:::..||.||   ..|:..:.|.|.:|.       :..|.....:.:|..|...
Mosquito   389 LINGGLLATDGNSSGIADLERAFGNPSNMIESLATSNPTEASIAGGVRTGGKKGADLMNNNECAI 453

  Fly   617 RDEERDIERERERERERDEDDEEEL 641
            :|.....|::...|.:.:|.::|.:
Mosquito   454 KDGLASSEQDSSSEIDCEEIEDESM 478

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H2	NP_523386.1	Homeodomain	381..437	CDD:459649	30/55 (55%)
lms	XP_555988.3	None