DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and HOXD13

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_000514.2 Gene:HOXD13 / 3239 HGNCID:5136 Length:343 Species:Homo sapiens


Alignment Length:433 Identity:98/433 - (22%)
Similarity:146/433 - (33%) Gaps:137/433 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 AVGGGMPRPASPAVGSNTTTATATTATRSR-FMITDILAGAAAASAAAAAAAAALAAASSGGGRG 92
            |.|||  ...:||..|:::.|.|..:.:.| |:...:.||..:..||||||||| |||::..|..
Human    14 ADGGG--AGGAPASSSSSSVAAAAASGQCRGFLSAPVFAGTHSGRAAAAAAAAA-AAAAAASGFA 75

  Fly    93 SPTDSEREQSLVAQHHHHHQQQQQHHHHQQQQQQQQHQQAALQQYIVQQQQLLRFERERERERER 157
            .|..|||..|                           ..::....:|    ..|.|....:|   
Human    76 YPGTSERTGS---------------------------SSSSSSSAVV----AARPEAPPAKE--- 106

  Fly   158 EHYRERHSPPGNNPYAHHPMPPHLLA-----HFPPAHYAVLQQQ---QQQQQQQQHPHPHHLQLE 214
                    .|...|.|....||...|     ||...:|:.....   .||...:..||.      
Human   107 --------CPAPTPAAAAAAPPSAPALGYGYHFGNGYYSCRMSHGVGLQQNALKSSPHA------ 157

  Fly   215 RERLEALHRHGHGLTGDPAQHLSHLSHLSHQQHHPHLHHPMHDERSRSPLMLQQLGGNGGNNNNN 279
                        .|.|.|.:....:|.|:                                    
Human   158 ------------SLGGFPVEKYMDVSGLA------------------------------------ 174

  Fly   280 NNNSSSASNNNNNNNNSASANSNIIS---GNSSSSNNNNG-----SGNGNMLLGGPGS----SIS 332
               |||..      .|...|.:..:|   |.:|...:..|     |..|:   |.|..    |:.
Human   175 ---SSSVP------ANEVPARAKEVSFYQGYTSPYQHVPGYIDMVSTFGS---GEPRHEAYISME 227

  Fly   333 GDQASTIDDSDSDD--CGGKDDDGDDSMKNGSSANGD-SSSHLSLSLSKKQRKARTAFTDHQLQT 394
            |.|:.|:.:..:..  |......|....|  ||..|| :.:...:.:.::.||.|..:|..||:.
Human   228 GYQSWTLANGWNSQVYCTKDQPQGSHFWK--SSFPGDVALNQPDMCVYRRGRKKRVPYTKLQLKE 290

  Fly   395 LEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKR 437
            ||..:...|:::...|..::....||:.||..|:||||.|.|:
Human   291 LENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVKDKK 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 20/55 (36%)
HOXD13NP_000514.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 6/15 (40%)
polyalanine repeat 57..71 12/14 (86%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..115 10/78 (13%)
HoxA13_N <100..172 CDD:463521 18/100 (18%)
Homeodomain 277..333 CDD:459649 20/55 (36%)

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