DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and HOXD3

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:345 Identity:87/345 - (25%)
Similarity:121/345 - (35%) Gaps:104/345 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 NGS----GNGNMLLGGPGSSISGDQAS-----------TIDDSDSDDCGG--------------- 349
            |||    |.||...||.||...|..:.           |:..|...:.||               
Human    87 NGSCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNASS 151

  Fly   350 -------------KDDDGDDSMKNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFER 401
                         |:...:...||..:..|:|....| ......::.|||:|..||..|||.|..
Human   152 SSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKS-PPGPASKRVRTAYTSAQLVELEKEFHF 215

  Fly   402 QKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKR-QTAVGLELLAEAGNYAAFQRLYGGATPY 465
            .:||....|:|:||.|.|::.|:|.|:||||.|:|: |.|.|:                      
Human   216 NRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGI---------------------- 258

  Fly   466 LSAWPYAAAAAAQSPHGATPSAIDIYYRQAAAAAAMQKPSLPASYRMYQSSIPPGMSLPGM--PA 528
                  ..:.|:|||..:.|..      .||...|            |...:||   :||:  .|
Human   259 ------LHSPASQSPERSPPLG------GAAGHVA------------YSGQLPP---VPGLAYDA 296

  Fly   529 PPPPGAAPMLSGYYAAAA--AAAASAGAQQQQQQPPAASRSPATSQ-----SANSEADCERTSSS 586
            |.||..|......|..||  |..:|...||::...|.....|..|.     |||.:........:
Human   297 PSPPAFAKSQPNMYGLAAYTAPLSSCLPQQKRYAAPEFEPHPMASNGGGFASANLQGSPVYVGGN 361

  Fly   587 SRQRLITPSPPL-NPGSPPH 605
            ..:.:...|.|: |.|...|
Human   362 FVESMAPASGPVFNLGHLSH 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 26/55 (47%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 21/110 (19%)
Antp-type hexapeptide 160..165 0/4 (0%)
Homeodomain 195..251 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 10/60 (17%)
DUF4074 369..430 CDD:463833 5/13 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432
Blue background indicates that the domain is not in the aligned region.

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