DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and CG11085

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster


Alignment Length:282 Identity:93/282 - (32%)
Similarity:119/282 - (42%) Gaps:76/282 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 LSHQQHHPHLHHPMHDERSRSPLMLQQLGGNGGNNNNNNNNSSSASNNNNNNNNSASANSNIISG 306
            |||  ||....|  |||.|....:....|                                  .|
  Fly    56 LSH--HHRRFTH--HDESSVESCLSATRG----------------------------------PG 82

  Fly   307 NSSSSNNNNGSGNGNMLLGGPGSSIS------GDQASTIDDSDSDDCGGKDDDGDDSMKNGSSAN 365
            :.:.|....|.|.|    ||..|.:|      |..|..:..:.|...|.:|.:|.....:|...:
  Fly    83 SGTGSGGGGGGGGG----GGVASGLSAAAAAAGVAAGLLAAAASGANGDRDANGGSGPGSGGGTS 143

  Fly   366 GDSSSH-LSLSLS-KKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWY 428
            |..:.| |.||.| :|.|:.|||||..||..||:.|..||||||.||.::|..|.||:.||||||
  Fly   144 GGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWY 208

  Fly   429 QNRRTKWKRQTAVGLELLAEAGNYAAFQRLY----GGATPYLSAWP----------YAAAAAAQS 479
            ||||||||||..:.||.|.   :.|..::.:    ||....|...|          .||||||.:
  Fly   209 QNRRTKWKRQNQLRLEQLR---HQATMEKDFVVQDGGGAGGLGCCPSGLSSSFSAAAAAAAAASN 270

  Fly   480 PHGATPSAIDIYYRQAAAAAAM 501
            |         ..:..:|||||:
  Fly   271 P---------CNFLTSAAAAAI 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 36/55 (65%)
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 36/55 (65%)

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