DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and hoxb4a

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_571193.1 Gene:hoxb4a / 30340 ZFINID:ZDB-GENE-990415-105 Length:246 Species:Danio rerio


Alignment Length:298 Identity:60/298 - (20%)
Similarity:94/298 - (31%) Gaps:127/298 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 NNPYAHHPMPP---HLLAHFPPAHYAVLQQQQQQQQQQQHPHPHHLQLERERLEALHRHGHGLT- 229
            |:.|.....||   :..:.:.|:|.......|:|....||             |:::....|.. 
Zfish     9 NSNYVDPKFPPCEEYSQSDYLPSHSPDYYSAQRQDPSFQH-------------ESIYHQRSGCAD 60

  Fly   230 ---------GDPAQHLSHLSH-LSHQQHHPHLHHPMHDERSRSPLMLQQLGGNGGNNNNNNNNSS 284
                     |.||..:|...| |........|..|.|...|.:|                  :..
Zfish    61 PPYSSCQGPGQPAAVISPRGHVLPTTALSTPLPEPSHHCDSVTP------------------SPP 107

  Fly   285 SASNNNNNNNNSASANS---------------NIISGNSSSSNNNNGSGNGNMLLGGPGSSISGD 334
            .|......:.|:::.:|               ||:|.|.|                         
Zfish   108 PACGQTPTSQNTSTVSSRKDPVVYPWMKKVHVNIVSPNYS------------------------- 147

  Fly   335 QASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSF 399
                         ||                             :.:::|||:|..|:..|||.|
Zfish   148 -------------GG-----------------------------EPKRSRTAYTRQQVLELEKEF 170

  Fly   400 ERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKR 437
            ...:||:.:.|:|:|:.|.||:.|:|.|:||||.|||:
Zfish   171 HYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKK 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 26/55 (47%)
hoxb4aNP_571193.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..125 21/132 (16%)
Antp-type hexapeptide 130..135 0/4 (0%)
Homeodomain 152..208 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..246
Blue background indicates that the domain is not in the aligned region.

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