DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and hoxb5a

DIOPT Version :10

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_571176.2 Gene:hoxb5a / 30317 ZFINID:ZDB-GENE-980526-70 Length:275 Species:Danio rerio


Alignment Length:254 Identity:63/254 - (24%)
Similarity:109/254 - (42%) Gaps:75/254 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 NNNNNNNSSSASNNNNNNNNSASANSNI----ISGNSSSSNNNNGSGNGNM-------------- 322
            |...::::.:||..::...:|.|...|.    :|.|.|:|..:.|:...|.              
Zfish    23 NYGTSSSAMNASYRDSGTMHSGSYGYNYNGMDLSVNRSTSTGHFGAVGDNSRVFQSPAPETRFRQ 87

  Fly   323 ------------------LLGGPGSSISGDQAST--------------IDD----SDSDDCGGKD 351
                              .||..|||...||::|              ||:    |::::...:.
Zfish    88 PSSCSLASPEPLPCSNSESLGPKGSSPPSDQSTTTAGNNLNSNTHFTEIDEASASSETEEASHRA 152

  Fly   352 DDG--------DDSMKNGSSANGDSSS----------HLSLSLSKKQ-RKARTAFTDHQLQTLEK 397
            ::.        :.:..:.:||..|..:          |:|..::... ::||||:|.:|...|||
Zfish   153 NNSAPRTQQKQETTATSTTSATSDGQAPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEK 217

  Fly   398 SFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNYAAFQ 456
            .|...:||:.:.|:|:|:.|.||:.|:|.|:||||.|||:...:....||.||  :|||
Zfish   218 EFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAG--SAFQ 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 27/55 (49%)
hoxb5aNP_571176.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..181 15/110 (14%)
Antp-type hexapeptide 182..187 0/4 (0%)
Homeodomain 201..257 CDD:459649 27/55 (49%)

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