DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H2 and tlx1

DIOPT Version :9

Sequence 1:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster
Sequence 2:NP_739571.1 Gene:tlx1 / 266964 ZFINID:ZDB-GENE-021021-2 Length:301 Species:Danio rerio


Alignment Length:221 Identity:70/221 - (31%)
Similarity:97/221 - (43%) Gaps:53/221 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 GNGGNNNNNNNNSSSASNNNNNNNNSASANSNIISGNSSSSNNNNGSG----NGNMLLGGPGSSI 331
            ||...||::..|.:|.|..:.|.|..|:.|.|.:          |.||    ..:..||...|||
Zfish    59 GNYNVNNSSGYNGNSCSVGSYNMNLGANVNGNCL----------NSSGVIRVPAHRPLGSVHSSI 113

  Fly   332 SGDQASTIDDSDSDDCGGKDDDGDDSMKNG------SSANGDSSSHLSLSLS------------- 377
            . ..|:|:....|        .|..:...|      .|....:....:::||             
Zfish   114 P-TSAATVPSMGS--------MGTINNLTGLTFPWMESNRRYTKDRFTVALSPFTVTRRIGHPYQ 169

  Fly   378 ----KKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQ 438
                .|::|.||:||..|:..|||.|.|||||:..:|..||..|:::|.|||||:|||||||:||
Zfish   170 NRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQ 234

  Fly   439 TAVGLELLAEAGN-------YAAFQR 457
            ||...|...:..|       ..|||:
Zfish   235 TAEEREAERQQANRILMQLQQEAFQK 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H2NP_523386.1 Homeobox 384..436 CDD:278475 30/51 (59%)
tlx1NP_739571.1 Homeobox 179..232 CDD:278475 30/52 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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