Protein Alignment B-H2 and Msx2

DIOPT Version :10

• Sequence 1: NP_523386.1
• Gene: B-H2 / 32723
• FlyBaseID: FBgn0004854
• Length: 645
• Species: Drosophila melanogaster
• Sequence 2: NP_037114.2
• Gene: Msx2 / 25483
• RGDID: 3116
• Length: 267
• Species: Rattus norvegicus
• Alignment Length: 196
• Identity: 56/196 - (28%)
• Similarity: 85/196 - (43%)
• Gaps: 34/196 - (17%)

  Fly   318 GNGNMLLGGPGSSISGDQASTIDDSDSDDCG------GKDDDGDDSMKNGSSANGDSSSHLSLSL 376
            |:|......||..:...:.:::...:|:|..      |:.......|         |.:..:|..
  Rat    83 GHGVRDAHSPGPLVKPFETASVKSENSEDGAPWIQEPGRYSPPPRHM---------SPTTCTLRK 138

  Fly   377 SKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAV 441
            .|..||.||.||..||..||:.|.:::|||:.:|.|.::.|.|::.|||.|:||||.|.||....
  Rat   139 HKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEA 203

  Fly   442 GLELLAEAGNYAAFQRLYGG-------------ATPYLSAWPYAAAAAAQSPHG--ATPSAIDIY 491
            .||.|    ..||...|..|             |:.|.:::|:........|.|  |||....:|
  Rat   204 ELEKL----KMAAKPMLPSGFSLPFPINSPLQAASIYSASYPFHRPVLPIPPVGLYATPVGYGMY 264

  Fly   492 Y 492
            :
  Rat   265 H 265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H2	NP_523386.1	Homeodomain	381..437	CDD:459649	27/55 (49%)
Msx2	NP_037114.2	Homeodomain	143..199	CDD:459649	27/55 (49%)